Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Lsm3P62311 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lsm3P62311 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lsm3P62311 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lsm3P62311 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm24665-201ENSMUST00000104160 129 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm12310-201ENSMUST00000118013 492 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm12220-201ENSMUST00000118476 172 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm13543-201ENSMUST00000121230 796 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm15694-201ENSMUST00000121984 283 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Lsm3P62311 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm6851-201ENSMUST00000154478 395 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm22847-201ENSMUST00000157707 105 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm4775-201ENSMUST00000169588 402 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.94□□□□□ -1.3
Lsm3P62311 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.94□□□□□ -1.3
Lsm3P62311 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm7891-201ENSMUST00000190284 843 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm29372-201ENSMUST00000191416 364 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Gm19035-202ENSMUST00000194575 959 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
Lsm3P62311 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Lsm3P62311 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 Dcpp1-201ENSMUST00000068580 617 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Lsm3P62311 Klk1b1-201ENSMUST00000078835 867 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm16026-201ENSMUST00000094774 580 ntBASIC6.94□□□□□ -1.3
Lsm3P62311 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC6.94□□□□□ -1.3
Lsm3P62311 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Lsm3P62311 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lsm3P62311 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 AC159810.1-201ENSMUST00000214838 1480 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm25502-201ENSMUST00000104428 131 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm14824-201ENSMUST00000119421 737 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm12943-201ENSMUST00000119616 210 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm16210-201ENSMUST00000122161 610 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm14813-201ENSMUST00000122291 395 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm6706-201ENSMUST00000145087 318 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm24786-201ENSMUST00000157379 109 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm27826-201ENSMUST00000175282 255 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm17748-201ENSMUST00000177906 522 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm11942-201ENSMUST00000180255 345 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm6931-201ENSMUST00000183103 371 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm28922-201ENSMUST00000189785 308 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm37247-201ENSMUST00000192549 730 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm3745-201ENSMUST00000193773 421 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm43287-201ENSMUST00000197747 600 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm8479-202ENSMUST00000204366 1070 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Lsm3P62311 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Gm19810-201ENSMUST00000218521 251 ntBASIC6.93□□□□□ -1.3
Lsm3P62311 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Lsm3P62311 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms