Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm12773-201ENSMUST00000120134 587 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm23657-201ENSMUST00000122623 294 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm23888-201ENSMUST00000122690 253 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm24682-201ENSMUST00000158764 137 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm22642-201ENSMUST00000175352 252 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC9.16□□□□□ -0.94
Col1a1P11087 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm42963-201ENSMUST00000202943 1217 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col1a1P11087 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col1a1P11087 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.16□□□□□ -0.94
Col1a1P11087 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Col1a1P11087 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm44802-201ENSMUST00000208026 1916 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm38177-201ENSMUST00000192213 1040 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC9.15□□□□□ -0.94
Col1a1P11087 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm7972-201ENSMUST00000208434 1137 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Gm45100-201ENSMUST00000209153 391 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Gm17995-201ENSMUST00000209266 530 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm31711-201ENSMUST00000220687 196 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 AC174678.3-201ENSMUST00000227568 362 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Col1a1P11087 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm42519-201ENSMUST00000199282 3656 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm45873-201ENSMUST00000211865 1915 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gm37829-201ENSMUST00000193864 2213 ntBASIC9.15□□□□□ -0.94
Col1a1P11087 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col1a1P11087 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col1a1P11087 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Col1a1P11087 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.15□□□□□ -0.95
Col1a1P11087 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Gm13252-201ENSMUST00000119355 321 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Gm11371-201ENSMUST00000120294 385 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Gm16523-201ENSMUST00000121253 592 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.95
Col1a1P11087 Gm27373-201ENSMUST00000184017 184 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Gm18980-201ENSMUST00000199098 1079 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Gm8539-201ENSMUST00000199822 501 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 AC162934.2-201ENSMUST00000221451 249 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 AC122459.3-201ENSMUST00000228508 1042 ntBASIC9.15□□□□□ -0.95
Col1a1P11087 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col1a1P11087 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC9.15□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms