Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm18779-201ENSMUST00000173444 577 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm18611-201ENSMUST00000200334 1118 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm44988-201ENSMUST00000203835 1161 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm45834-201ENSMUST00000212445 454 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC166358.1-201ENSMUST00000220677 105 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC153662.2-201ENSMUST00000221097 120 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC156037.2-201ENSMUST00000221284 112 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC166341.6-201ENSMUST00000221528 105 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC159263.2-201ENSMUST00000221593 411 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm9472-201ENSMUST00000221625 526 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 CT030242.1-201ENSMUST00000221945 125 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC124772.2-201ENSMUST00000222049 154 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC153663.1-201ENSMUST00000222165 120 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 CT030157.1-201ENSMUST00000222355 148 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC150661.2-201ENSMUST00000222418 105 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 AC127242.2-201ENSMUST00000223138 148 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm14267-208ENSMUST00000228324 1189 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm4491-201ENSMUST00000159455 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Gm46339-201ENSMUST00000222720 3539 ntBASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ube3bQ9ES34 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm22150-201ENSMUST00000104447 135 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm14830-201ENSMUST00000121899 700 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm12819-201ENSMUST00000122223 629 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm4252-201ENSMUST00000174823 313 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm43810-201ENSMUST00000201018 232 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm6308-201ENSMUST00000203226 313 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm18943-201ENSMUST00000207357 1216 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm5609-201ENSMUST00000210008 1267 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm2915-201ENSMUST00000222565 787 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 AC158523.2-201ENSMUST00000222708 548 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 AC131745.3-201ENSMUST00000223582 554 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 AC129975.2-201ENSMUST00000223705 775 ntBASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Mrps31-201ENSMUST00000033934 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm26583-201ENSMUST00000181436 3684 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube3bQ9ES34 Gm37843-201ENSMUST00000195213 2639 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms