Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm22426-201ENSMUST00000103811 96 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm24257-201ENSMUST00000104472 131 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm14056-201ENSMUST00000117198 642 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Scgb2b30-201ENSMUST00000187013 336 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm29143-201ENSMUST00000189462 201 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Scgb2b10-201ENSMUST00000191403 318 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Ighv5-1-201ENSMUST00000193324 353 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm17977-201ENSMUST00000198743 574 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm45074-201ENSMUST00000209091 1240 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Gm20302-201ENSMUST00000080671 275 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 AC107757.2-201ENSMUST00000226370 1466 ntBASIC9.28□□□□□ -0.92
Cchcr1Q8K2I2 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cchcr1Q8K2I2 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Cchcr1Q8K2I2 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cchcr1Q8K2I2 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
Cchcr1Q8K2I2 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC9.27□□□□□ -0.92
Cchcr1Q8K2I2 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Mir1932-201ENSMUST00000157390 90 ntBASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm29362-201ENSMUST00000187898 133 ntBASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm8010-201ENSMUST00000194128 873 ntBASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 AC125074.1-201ENSMUST00000227970 1331 ntBASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cchcr1Q8K2I2 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm44249-201ENSMUST00000204538 1805 ntBASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 CU024890.1-201ENSMUST00000221361 2019 ntBASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm24472-201ENSMUST00000104484 132 ntBASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Gm26048-201ENSMUST00000157305 142 ntBASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.26□□□□□ -0.93
Cchcr1Q8K2I2 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 303.3 ms