Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Recql-203ENSMUST00000111803 3389 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdh19Q80TF3 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Cyp4a29-201ENSMUST00000118278 1530 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm10302-201ENSMUST00000174433 3535 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm12445-201ENSMUST00000117947 885 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm11875-201ENSMUST00000118187 799 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Psph-202ENSMUST00000118268 785 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm14369-201ENSMUST00000121355 285 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm23441-201ENSMUST00000157268 127 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm3008-201ENSMUST00000160566 571 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Tctex1d1-206ENSMUST00000169211 1000 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm24307-201ENSMUST00000178512 101 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm29240-201ENSMUST00000187248 286 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm37669-201ENSMUST00000192184 820 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm43394-201ENSMUST00000198671 694 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm6308-201ENSMUST00000203226 313 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm18193-201ENSMUST00000210017 772 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 AC159622.1-201ENSMUST00000221004 554 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm5789-201ENSMUST00000222643 865 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 AC159242.1-201ENSMUST00000225832 194 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 AC131117.2-203ENSMUST00000225886 950 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 AC122251.1-201ENSMUST00000227717 639 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Snora74a-201ENSMUST00000083715 196 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Gm10364-201ENSMUST00000076633 1328 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdh19Q80TF3 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms