Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm21569-201ENSMUST00000222683 2036 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Tfrc-202ENSMUST00000120680 1860 ntTSL 2 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm35288-201ENSMUST00000216565 2731 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm24334-201ENSMUST00000104210 128 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm11558-201ENSMUST00000118454 459 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Ctrcos-201ENSMUST00000128368 322 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm23077-201ENSMUST00000157854 116 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm26590-201ENSMUST00000180857 1277 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm24362-201ENSMUST00000183220 416 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm37708-201ENSMUST00000192337 895 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm43478-201ENSMUST00000200381 292 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm43461-201ENSMUST00000202351 996 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm8703-201ENSMUST00000203793 730 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm44722-201ENSMUST00000206473 436 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 AC159476.2-201ENSMUST00000216221 418 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm2398-201ENSMUST00000218347 883 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm14267-208ENSMUST00000228324 1189 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm38383-201ENSMUST00000194131 2660 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Gm44998-201ENSMUST00000207091 1768 ntBASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc85bQ6PDY0 Zc3hav1-204ENSMUST00000143702 3364 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Supt7l-202ENSMUST00000200721 1657 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Gm38215-201ENSMUST00000192321 2233 ntBASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 4930435N07Rik-201ENSMUST00000208065 2127 ntBASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 9330104G04Rik-202ENSMUST00000205647 1943 ntBASIC8.65□□□□□ -1.02
Ccdc85bQ6PDY0 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms