Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.68□□□□□ -1.02
Cntn3Q07409 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm15585-201ENSMUST00000149696 670 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm17091-201ENSMUST00000163248 357 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm18402-201ENSMUST00000203834 586 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 AC159476.2-201ENSMUST00000216221 418 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 AC159297.2-201ENSMUST00000219567 1075 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm272-201ENSMUST00000222073 919 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 AC163660.3-202ENSMUST00000224917 464 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 AC133517.2-201ENSMUST00000226820 690 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Olfr979-201ENSMUST00000080835 1045 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cntn3Q07409 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.68□□□□□ -1.02
Cntn3Q07409 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
Cntn3Q07409 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm25761-201ENSMUST00000103983 128 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm14648-201ENSMUST00000119328 483 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.67□□□□□ -1.02
Cntn3Q07409 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.67□□□□□ -1.02
Cntn3Q07409 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm8540-201ENSMUST00000168952 732 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm17051-201ENSMUST00000170787 487 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Snhg7-201ENSMUST00000181621 139 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.67□□□□□ -1.02
Cntn3Q07409 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm19002-201ENSMUST00000192649 1012 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm38164-201ENSMUST00000192810 330 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm37599-201ENSMUST00000193067 489 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm2429-201ENSMUST00000194635 586 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Ighv8-1-201ENSMUST00000194897 291 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Cntn3Q07409 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm6290-201ENSMUST00000207666 1158 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 Gm45674-201ENSMUST00000210043 450 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Cntn3Q07409 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Cntn3Q07409 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 AC159263.2-201ENSMUST00000221593 411 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC8.67□□□□□ -1.02
Cntn3Q07409 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.67□□□□□ -1.02
Cntn3Q07409 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms