Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13281-201ENSMUST00000120871 567 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm4908-201ENSMUST00000121923 1005 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm15694-201ENSMUST00000121984 283 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm11686-201ENSMUST00000122397 333 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm6695-201ENSMUST00000177264 1172 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm17748-201ENSMUST00000177906 522 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm8850-201ENSMUST00000195316 588 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC6.39□□□□□ -1.39
Hmgb3O54879 AC161117.2-201ENSMUST00000221908 451 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Lnpk-202ENSMUST00000102676 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Gm37886-201ENSMUST00000195349 1513 ntBASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hmgb3O54879 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hmgb3O54879 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm7910-201ENSMUST00000117896 835 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm8661-201ENSMUST00000118688 992 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm12773-201ENSMUST00000120134 587 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm13358-201ENSMUST00000121427 569 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm15580-201ENSMUST00000121587 556 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm14813-201ENSMUST00000122291 395 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm16238-201ENSMUST00000159343 586 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm25306-201ENSMUST00000175288 117 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm22616-201ENSMUST00000179783 100 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Mir6909-201ENSMUST00000184212 62 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm27483-201ENSMUST00000184983 71 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Hmgb3O54879 AC153798.1-201ENSMUST00000219942 244 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm7476-201ENSMUST00000220112 661 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC025913.1-202ENSMUST00000220385 824 ntTSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 AC122533.2-201ENSMUST00000223772 545 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC158531.1-201ENSMUST00000224617 457 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC154595.1-201ENSMUST00000225533 1059 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC110236.1-201ENSMUST00000227807 527 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 AC164433.1-201ENSMUST00000226138 1544 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm44167-201ENSMUST00000204957 1878 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Grik1-209ENSMUST00000227986 2942 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hmgb3O54879 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hmgb3O54879 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.38□□□□□ -1.39
Hmgb3O54879 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms