Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8004-201ENSMUST00000187782 617 ntBASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.02□□□□□ -1.13
Col4a6B1AVK5 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Gm44162-201ENSMUST00000203543 544 ntBASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.02□□□□□ -1.13
Col4a6B1AVK5 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col4a6B1AVK5 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm12183-201ENSMUST00000120566 1848 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Synpo2-201ENSMUST00000051443 3719 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm7821-201ENSMUST00000117111 788 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm13243-201ENSMUST00000117481 565 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm12773-201ENSMUST00000120134 587 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm26179-201ENSMUST00000177723 132 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm29509-201ENSMUST00000185716 321 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm44356-201ENSMUST00000196731 111 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Gm38352-201ENSMUST00000194459 2557 ntBASIC8.01□□□□□ -1.13
Col4a6B1AVK5 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm11799-201ENSMUST00000116110 460 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm13260-201ENSMUST00000117797 1264 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm12024-201ENSMUST00000118819 1253 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm13486-201ENSMUST00000119910 282 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm9378-201ENSMUST00000120315 471 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm27218-201ENSMUST00000183745 392 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Mir7084-201ENSMUST00000183876 70 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Mir8120-201ENSMUST00000185035 139 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm29369-201ENSMUST00000190674 615 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8□□□□□ -1.13
Col4a6B1AVK5 AC151901.1-201ENSMUST00000218274 180 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col4a6B1AVK5 AC124397.1-201ENSMUST00000224296 653 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 AC091237.1-201ENSMUST00000224911 637 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col4a6B1AVK5 n-R5s41-201ENSMUST00000083025 119 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8□□□□□ -1.13
Col4a6B1AVK5 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col4a6B1AVK5 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms