Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Gm38205-201ENSMUST00000192243 258 ntBASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl40Q9Z2Q5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl40Q9Z2Q5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl40Q9Z2Q5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mrpl40Q9Z2Q5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Golph3-205ENSMUST00000228671 2842 ntBASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mrpl40Q9Z2Q5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Mir5133-201ENSMUST00000174955 77 ntBASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mrpl40Q9Z2Q5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mrpl40Q9Z2Q5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mrpl40Q9Z2Q5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mrpl40Q9Z2Q5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mrpl40Q9Z2Q5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Mrpl40Q9Z2Q5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms