Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clip2Q9Z0H8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clip2Q9Z0H8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Gm26524-201ENSMUST00000192339 390 ntBASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clip2Q9Z0H8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Clip2Q9Z0H8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clip2Q9Z0H8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clip2Q9Z0H8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Rab3c-203ENSMUST00000224180 967 ntBASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clip2Q9Z0H8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Clip2Q9Z0H8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.66■■□□□ 1.06
Clip2Q9Z0H8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.65■■□□□ 1.06
Clip2Q9Z0H8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms