Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dio3-201ENSMUST00000097228 1449 ntBASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcb1Q9Z0H3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcb1Q9Z0H3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcb1Q9Z0H3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcb1Q9Z0H3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smarcb1Q9Z0H3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smarcb1Q9Z0H3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcb1Q9Z0H3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.33■□□□□ 0.69
Smarcb1Q9Z0H3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcb1Q9Z0H3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Gm27275-201ENSMUST00000184318 272 ntBASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcb1Q9Z0H3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms