Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp6ap1Q9R1Q9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atp6ap1Q9R1Q9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp6ap1Q9R1Q9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp6ap1Q9R1Q9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp6ap1Q9R1Q9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp6ap1Q9R1Q9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp6ap1Q9R1Q9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp6ap1Q9R1Q9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp6ap1Q9R1Q9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.2■□□□□ 0.5
Atp6ap1Q9R1Q9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms