Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubd1Q9R1K7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubd1Q9R1K7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubd1Q9R1K7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tubd1Q9R1K7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubd1Q9R1K7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.06■□□□□ 0.64
Tubd1Q9R1K7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tubd1Q9R1K7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Gm7291-201ENSMUST00000199147 382 ntBASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.04■□□□□ 0.64
Tubd1Q9R1K7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tubd1Q9R1K7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubd1Q9R1K7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tubd1Q9R1K7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tubd1Q9R1K7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubd1Q9R1K7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Gm37179-201ENSMUST00000194862 823 ntBASIC19■□□□□ 0.63
Tubd1Q9R1K7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tubd1Q9R1K7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms