Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a4Q9QZR9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.02■□□□□ 0.63
Col4a4Q9QZR9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a4Q9QZR9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a4Q9QZR9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a4Q9QZR9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a4Q9QZR9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a4Q9QZR9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19■□□□□ 0.63
Col4a4Q9QZR9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a4Q9QZR9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col4a4Q9QZR9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a4Q9QZR9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Gm14859-201ENSMUST00000117752 357 ntBASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col4a4Q9QZR9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col4a4Q9QZR9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a4Q9QZR9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms