Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Golph3-205ENSMUST00000228671 2842 ntBASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Gm6211-202ENSMUST00000167849 925 ntBASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Mir5133-201ENSMUST00000174955 77 ntBASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Gm29257-201ENSMUST00000186115 639 ntBASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx5Q9JL61 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx5Q9JL61 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfx5Q9JL61 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx5Q9JL61 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfx5Q9JL61 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx5Q9JL61 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Gm10602-201ENSMUST00000098239 609 ntBASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.75■□□□□ 0.75
Rfx5Q9JL61 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms