Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpf2Q9JJ80 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rpf2Q9JJ80 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpf2Q9JJ80 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpf2Q9JJ80 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Smad6-203ENSMUST00000179458 273 ntBASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rpf2Q9JJ80 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpf2Q9JJ80 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpf2Q9JJ80 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpf2Q9JJ80 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.83■□□□□ 0.77
Rpf2Q9JJ80 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpf2Q9JJ80 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.83■□□□□ 0.76
Rpf2Q9JJ80 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpf2Q9JJ80 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpf2Q9JJ80 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpf2Q9JJ80 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Gm11421-201ENSMUST00000122124 294 ntBASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpf2Q9JJ80 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpf2Q9JJ80 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Rpf2Q9JJ80 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Gm27801-201ENSMUST00000184174 223 ntBASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf2Q9JJ80 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf2Q9JJ80 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rpf2Q9JJ80 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms