Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Gm13158-201ENSMUST00000122007 736 ntBASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rrp8Q9DB85 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rrp8Q9DB85 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rrp8Q9DB85 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rrp8Q9DB85 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rrp8Q9DB85 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rrp8Q9DB85 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rrp8Q9DB85 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.26■□□□□ 0.51
Rrp8Q9DB85 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.26■□□□□ 0.51
Rrp8Q9DB85 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rrp8Q9DB85 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.24■□□□□ 0.51
Rrp8Q9DB85 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrp8Q9DB85 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Mir1199-201ENSMUST00000117015 119 ntBASIC18.22■□□□□ 0.51
Rrp8Q9DB85 Gm37055-201ENSMUST00000191866 133 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms