Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Llcfc1Q9D9P8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Llcfc1Q9D9P8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.66■□□□□ 0.74
Llcfc1Q9D9P8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Llcfc1Q9D9P8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Llcfc1Q9D9P8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Llcfc1Q9D9P8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Llcfc1Q9D9P8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Llcfc1Q9D9P8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Llcfc1Q9D9P8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Llcfc1Q9D9P8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Llcfc1Q9D9P8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Llcfc1Q9D9P8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Llcfc1Q9D9P8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms