Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc130Q9D516 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Gm26833-201ENSMUST00000180899 440 ntBASIC18.65■□□□□ 0.58
Ccdc130Q9D516 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.65■□□□□ 0.58
Ccdc130Q9D516 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc130Q9D516 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Ccdc130Q9D516 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc130Q9D516 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc130Q9D516 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc130Q9D516 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc130Q9D516 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc130Q9D516 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc130Q9D516 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc130Q9D516 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms