Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Mir1199-201ENSMUST00000117015 119 ntBASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snx29Q9D3S3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Gm11927-201ENSMUST00000118472 759 ntBASIC20.61■□□□□ 0.89
Snx29Q9D3S3 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snx29Q9D3S3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.6■□□□□ 0.89
Snx29Q9D3S3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snx29Q9D3S3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Snx29Q9D3S3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Snx29Q9D3S3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snx29Q9D3S3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Gm13836-201ENSMUST00000121159 501 ntBASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Gm7977-201ENSMUST00000193787 748 ntBASIC20.56■□□□□ 0.88
Snx29Q9D3S3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snx29Q9D3S3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms