Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk1aQ9D132 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.69■□□□□ 0.42
Upk1aQ9D132 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk1aQ9D132 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.68■□□□□ 0.42
Upk1aQ9D132 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.68■□□□□ 0.42
Upk1aQ9D132 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk1aQ9D132 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.67■□□□□ 0.42
Upk1aQ9D132 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Upk1aQ9D132 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Gm9847-201ENSMUST00000052528 599 ntBASIC17.66■□□□□ 0.42
Upk1aQ9D132 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1aQ9D132 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.65■□□□□ 0.42
Upk1aQ9D132 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.65■□□□□ 0.42
Upk1aQ9D132 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1aQ9D132 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.64■□□□□ 0.42
Upk1aQ9D132 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Upk1aQ9D132 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1aQ9D132 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1aQ9D132 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.64■□□□□ 0.41
Upk1aQ9D132 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms