Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ddx47Q9CWX9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx47Q9CWX9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ddx47Q9CWX9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx47Q9CWX9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.17■□□□□ 0.66
Ddx47Q9CWX9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx47Q9CWX9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx47Q9CWX9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx47Q9CWX9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx47Q9CWX9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms