Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smc3Q9CW03 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.93■■□□□ 1.1
Smc3Q9CW03 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.93■■□□□ 1.1
Smc3Q9CW03 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smc3Q9CW03 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.93■■□□□ 1.1
Smc3Q9CW03 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.93■■□□□ 1.1
Smc3Q9CW03 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.92■■□□□ 1.1
Smc3Q9CW03 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smc3Q9CW03 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.91■■□□□ 1.1
Smc3Q9CW03 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smc3Q9CW03 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.9■■□□□ 1.1
Smc3Q9CW03 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
Smc3Q9CW03 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smc3Q9CW03 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smc3Q9CW03 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Gm6139-201ENSMUST00000079261 882 ntBASIC21.89■■□□□ 1.09
Smc3Q9CW03 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smc3Q9CW03 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Gm40848-201ENSMUST00000221998 324 ntBASIC21.88■■□□□ 1.09
Smc3Q9CW03 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smc3Q9CW03 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc3Q9CW03 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc3Q9CW03 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.86■■□□□ 1.09
Smc3Q9CW03 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.86■■□□□ 1.09
Smc3Q9CW03 Grk6-206ENSMUST00000224995 2971 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms