Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chchd1Q9CQA6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chchd1Q9CQA6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chchd1Q9CQA6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Chchd1Q9CQA6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Chchd1Q9CQA6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chchd1Q9CQA6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chchd1Q9CQA6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.12□□□□□ -0.15
Chchd1Q9CQA6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms