Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh23Q99PF4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh23Q99PF4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh23Q99PF4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh23Q99PF4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.27■□□□□ 0.67
Cdh23Q99PF4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.27■□□□□ 0.67
Cdh23Q99PF4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdh23Q99PF4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh23Q99PF4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Gm3375-201ENSMUST00000203929 796 ntBASIC19.25■□□□□ 0.67
Cdh23Q99PF4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Gm44771-201ENSMUST00000206975 626 ntBASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh23Q99PF4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdh23Q99PF4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh23Q99PF4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh23Q99PF4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Odf3b-204ENSMUST00000227834 930 ntBASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh23Q99PF4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh23Q99PF4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms