Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.6■□□□□ 0.73
Usp11Q99K46 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Usp11Q99K46 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.6■□□□□ 0.73
Usp11Q99K46 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.6■□□□□ 0.73
Usp11Q99K46 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.6■□□□□ 0.73
Usp11Q99K46 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp11Q99K46 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Usp11Q99K46 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp11Q99K46 Gm18284-201ENSMUST00000172604 624 ntBASIC19.59■□□□□ 0.73
Usp11Q99K46 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp11Q99K46 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp11Q99K46 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp11Q99K46 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.58■□□□□ 0.73
Usp11Q99K46 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Usp11Q99K46 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.58■□□□□ 0.72
Usp11Q99K46 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.58■□□□□ 0.72
Usp11Q99K46 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp11Q99K46 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Gm10493-201ENSMUST00000097270 612 ntBASIC19.58■□□□□ 0.72
Usp11Q99K46 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp11Q99K46 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp11Q99K46 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp11Q99K46 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Usp11Q99K46 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp11Q99K46 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.57■□□□□ 0.72
Usp11Q99K46 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp11Q99K46 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp11Q99K46 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.56■□□□□ 0.72
Usp11Q99K46 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp11Q99K46 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp11Q99K46 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Usp11Q99K46 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Usp11Q99K46 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.55■□□□□ 0.72
Usp11Q99K46 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp11Q99K46 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp11Q99K46 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Usp11Q99K46 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.54■□□□□ 0.72
Usp11Q99K46 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.54■□□□□ 0.72
Usp11Q99K46 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Usp11Q99K46 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Usp11Q99K46 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp11Q99K46 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms