Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Homer3Q99JP6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.56■□□□□ 0.56
Homer3Q99JP6 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.56■□□□□ 0.56
Homer3Q99JP6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Homer3Q99JP6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Homer3Q99JP6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Homer3Q99JP6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.53■□□□□ 0.56
Homer3Q99JP6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.53■□□□□ 0.56
Homer3Q99JP6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Homer3Q99JP6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.52■□□□□ 0.56
Homer3Q99JP6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.52■□□□□ 0.56
Homer3Q99JP6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.52■□□□□ 0.56
Homer3Q99JP6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.52■□□□□ 0.56
Homer3Q99JP6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Homer3Q99JP6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Homer3Q99JP6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.51■□□□□ 0.55
Homer3Q99JP6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.51■□□□□ 0.55
Homer3Q99JP6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.51■□□□□ 0.55
Homer3Q99JP6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Homer3Q99JP6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms