Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Rfc4Q99J62 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfc4Q99J62 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rfc4Q99J62 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rfc4Q99J62 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfc4Q99J62 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.57■■□□□ 1.04
Rfc4Q99J62 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rfc4Q99J62 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.57■■□□□ 1.04
Rfc4Q99J62 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfc4Q99J62 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rfc4Q99J62 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Gm15565-201ENSMUST00000118890 427 ntBASIC21.55■■□□□ 1.04
Rfc4Q99J62 Gm13158-201ENSMUST00000122007 736 ntBASIC21.55■■□□□ 1.04
Rfc4Q99J62 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.55■■□□□ 1.04
Rfc4Q99J62 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rfc4Q99J62 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Mir1199-201ENSMUST00000117015 119 ntBASIC21.54■■□□□ 1.04
Rfc4Q99J62 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Gm37055-201ENSMUST00000191866 133 ntBASIC21.54■■□□□ 1.04
Rfc4Q99J62 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.54■■□□□ 1.04
Rfc4Q99J62 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.54■■□□□ 1.04
Rfc4Q99J62 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.54■■□□□ 1.04
Rfc4Q99J62 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.53■■□□□ 1.04
Rfc4Q99J62 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.53■■□□□ 1.04
Rfc4Q99J62 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Rfc4Q99J62 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfc4Q99J62 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfc4Q99J62 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rfc4Q99J62 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rfc4Q99J62 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.51■■□□□ 1.03
Rfc4Q99J62 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rfc4Q99J62 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfc4Q99J62 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms