Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Gm15546-201ENSMUST00000122095 826 ntBASIC16.65■□□□□ 0.26
Thumpd1Q99J36 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Gm5812-201ENSMUST00000061073 957 ntBASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thumpd1Q99J36 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.64■□□□□ 0.25
Thumpd1Q99J36 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Thumpd1Q99J36 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thumpd1Q99J36 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Gm9959-201ENSMUST00000068277 390 ntBASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd1Q99J36 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd1Q99J36 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd1Q99J36 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms