Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm9Q96EQ9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prdm9Q96EQ9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prdm9Q96EQ9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.39■□□□□ 0.53
Prdm9Q96EQ9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm9Q96EQ9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.39■□□□□ 0.53
Prdm9Q96EQ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm9Q96EQ9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm9Q96EQ9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prdm9Q96EQ9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prdm9Q96EQ9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prdm9Q96EQ9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.35■□□□□ 0.53
Prdm9Q96EQ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prdm9Q96EQ9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prdm9Q96EQ9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.53
Prdm9Q96EQ9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prdm9Q96EQ9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prdm9Q96EQ9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms