Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb1Q91Y08 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Gm42778-201ENSMUST00000199644 553 ntBASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb1Q91Y08 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb1Q91Y08 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb1Q91Y08 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb1Q91Y08 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhb1Q91Y08 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb1Q91Y08 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb1Q91Y08 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb1Q91Y08 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb1Q91Y08 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb1Q91Y08 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb1Q91Y08 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms