Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga6Q91XY2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga6Q91XY2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Pcdhga6Q91XY2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga6Q91XY2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdhga6Q91XY2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhga6Q91XY2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga6Q91XY2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Gm37055-201ENSMUST00000191866 133 ntBASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga6Q91XY2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms