Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Gm9988-201ENSMUST00000069786 435 ntBASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgb4Q91XX6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Reep4-203ENSMUST00000226563 1444 ntBASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhgb4Q91XX6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb4Q91XX6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb4Q91XX6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhgb4Q91XX6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb4Q91XX6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb4Q91XX6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhgb4Q91XX6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb4Q91XX6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms