Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.53■□□□□ 0.56
Pcdhgb5Q91XX5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Dio3-201ENSMUST00000097228 1449 ntBASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Gm18666-201ENSMUST00000190039 958 ntBASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb5Q91XX5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb5Q91XX5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb5Q91XX5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb5Q91XX5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb5Q91XX5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Gm5643-201ENSMUST00000117081 966 ntBASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb5Q91XX5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb5Q91XX5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb5Q91XX5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb5Q91XX5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb5Q91XX5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhgb5Q91XX5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms