Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Sh3kbp1Q8R550 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3kbp1Q8R550 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3kbp1Q8R550 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3kbp1Q8R550 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3kbp1Q8R550 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3kbp1Q8R550 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Gm7290-201ENSMUST00000104990 617 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Gm12527-201ENSMUST00000117967 564 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Gm12918-201ENSMUST00000120234 636 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Gm15710-201ENSMUST00000121821 636 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Gm5075-201ENSMUST00000196916 622 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3kbp1Q8R550 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms