Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slf1Q8R3P9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slf1Q8R3P9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slf1Q8R3P9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.82■□□□□ 0.6
Slf1Q8R3P9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slf1Q8R3P9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Slf1Q8R3P9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Slf1Q8R3P9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slf1Q8R3P9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slf1Q8R3P9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slf1Q8R3P9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms