Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nudcd3Q8R1N4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nudcd3Q8R1N4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Nudcd3Q8R1N4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nudcd3Q8R1N4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nudcd3Q8R1N4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nudcd3Q8R1N4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nudcd3Q8R1N4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nudcd3Q8R1N4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms