Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zcchc9Q8R1J3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zcchc9Q8R1J3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Zcchc9Q8R1J3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Zcchc9Q8R1J3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zcchc9Q8R1J3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zcchc9Q8R1J3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zcchc9Q8R1J3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zcchc9Q8R1J3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Zcchc9Q8R1J3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Zcchc9Q8R1J3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms