Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim31Q8R0K2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim31Q8R0K2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.18■□□□□ 0.5
Trim31Q8R0K2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim31Q8R0K2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 AV356131-201ENSMUST00000206201 750 ntBASIC18.16■□□□□ 0.5
Trim31Q8R0K2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim31Q8R0K2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim31Q8R0K2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim31Q8R0K2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim31Q8R0K2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim31Q8R0K2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.14■□□□□ 0.49
Trim31Q8R0K2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim31Q8R0K2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.13■□□□□ 0.49
Trim31Q8R0K2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Gm27405-201ENSMUST00000184201 112 ntBASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim31Q8R0K2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim31Q8R0K2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms