Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Golph3-205ENSMUST00000228671 2842 ntBASIC17.61■□□□□ 0.41
Clrn1Q8K445 Gm13146-201ENSMUST00000118508 780 ntBASIC17.61■□□□□ 0.41
Clrn1Q8K445 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clrn1Q8K445 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn1Q8K445 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn1Q8K445 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.59■□□□□ 0.41
Clrn1Q8K445 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.59■□□□□ 0.41
Clrn1Q8K445 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn1Q8K445 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn1Q8K445 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Clrn1Q8K445 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Clrn1Q8K445 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn1Q8K445 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.58■□□□□ 0.4
Clrn1Q8K445 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn1Q8K445 Gm10033-202ENSMUST00000211874 928 ntBASIC17.58■□□□□ 0.4
Clrn1Q8K445 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clrn1Q8K445 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn1Q8K445 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn1Q8K445 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.57■□□□□ 0.4
Clrn1Q8K445 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn1Q8K445 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.56■□□□□ 0.4
Clrn1Q8K445 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Gm8495-201ENSMUST00000188740 694 ntBASIC17.56■□□□□ 0.4
Clrn1Q8K445 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms