Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cchcr1Q8K2I2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cchcr1Q8K2I2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cchcr1Q8K2I2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Gm38205-201ENSMUST00000192243 258 ntBASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cchcr1Q8K2I2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cchcr1Q8K2I2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cchcr1Q8K2I2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cchcr1Q8K2I2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Cchcr1Q8K2I2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cchcr1Q8K2I2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cchcr1Q8K2I2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.01■■□□□ 1.11
Cchcr1Q8K2I2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Gm21168-201ENSMUST00000199646 1096 ntBASIC22■■□□□ 1.11
Cchcr1Q8K2I2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms