Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rbm28Q8CGC6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Gm26524-201ENSMUST00000192339 390 ntBASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rbm28Q8CGC6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rbm28Q8CGC6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rbm28Q8CGC6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rbm28Q8CGC6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Gm20049-201ENSMUST00000219950 730 ntBASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rbm28Q8CGC6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rbm28Q8CGC6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rbm28Q8CGC6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.98■■□□□ 1.11
Rbm28Q8CGC6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rbm28Q8CGC6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rbm28Q8CGC6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms