Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Gm6576-201ENSMUST00000169678 883 ntBASIC18.2■□□□□ 0.5
Rab43Q8CG50 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab43Q8CG50 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.19■□□□□ 0.5
Rab43Q8CG50 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab43Q8CG50 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.18■□□□□ 0.5
Rab43Q8CG50 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Gm11249-201ENSMUST00000117071 859 ntBASIC18.18■□□□□ 0.5
Rab43Q8CG50 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rab43Q8CG50 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab43Q8CG50 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.16■□□□□ 0.5
Rab43Q8CG50 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Gm2399-201ENSMUST00000104944 225 ntBASIC18.16■□□□□ 0.5
Rab43Q8CG50 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.16■□□□□ 0.5
Rab43Q8CG50 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab43Q8CG50 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.16■□□□□ 0.5
Rab43Q8CG50 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab43Q8CG50 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.15■□□□□ 0.5
Rab43Q8CG50 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.14■□□□□ 0.49
Rab43Q8CG50 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab43Q8CG50 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms