Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.06■■□□□ 1.28
Smc4Q8CG47 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Smc4Q8CG47 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Smc4Q8CG47 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Gm10653-202ENSMUST00000139570 835 ntBASIC23.04■■□□□ 1.28
Smc4Q8CG47 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.04■■□□□ 1.28
Smc4Q8CG47 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smc4Q8CG47 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Smc4Q8CG47 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Smc4Q8CG47 Gm43672-201ENSMUST00000199072 1731 ntBASIC23.02■■□□□ 1.28
Smc4Q8CG47 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Smc4Q8CG47 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Smc4Q8CG47 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Smc4Q8CG47 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23■■□□□ 1.27
Smc4Q8CG47 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23■■□□□ 1.27
Smc4Q8CG47 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smc4Q8CG47 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Smc4Q8CG47 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smc4Q8CG47 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Smc4Q8CG47 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Smc4Q8CG47 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Smc4Q8CG47 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.98■■□□□ 1.27
Smc4Q8CG47 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.97■■□□□ 1.27
Smc4Q8CG47 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Smc4Q8CG47 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Smc4Q8CG47 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Smc4Q8CG47 Gm8520-201ENSMUST00000186517 868 ntBASIC22.96■■□□□ 1.27
Smc4Q8CG47 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.96■■□□□ 1.27
Smc4Q8CG47 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Smc4Q8CG47 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Smc4Q8CG47 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms