Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.17■■□□□ 1.3
Smc5Q8CG46 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Smc5Q8CG46 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Gm42900-201ENSMUST00000197184 2167 ntBASIC23.16■■□□□ 1.3
Smc5Q8CG46 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smc5Q8CG46 Gm5828-201ENSMUST00000071842 1860 ntBASIC23.15■■□□□ 1.3
Smc5Q8CG46 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Gm13241-201ENSMUST00000094493 780 ntBASIC23.15■■□□□ 1.3
Smc5Q8CG46 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Smc5Q8CG46 Gm37811-201ENSMUST00000192416 2601 ntBASIC23.14■■□□□ 1.3
Smc5Q8CG46 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Smc5Q8CG46 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Smc5Q8CG46 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Smc5Q8CG46 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.14■■□□□ 1.29
Smc5Q8CG46 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Smc5Q8CG46 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Smc5Q8CG46 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.14■■□□□ 1.29
Smc5Q8CG46 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Gm8493-201ENSMUST00000196881 489 ntBASIC23.13■■□□□ 1.29
Smc5Q8CG46 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Smc5Q8CG46 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Smc5Q8CG46 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Smc5Q8CG46 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Smc5Q8CG46 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc5Q8CG46 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Smc5Q8CG46 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Smc5Q8CG46 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.09■■□□□ 1.29
Smc5Q8CG46 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms