Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc38Q8CDN8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc38Q8CDN8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc38Q8CDN8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc38Q8CDN8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc38Q8CDN8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc38Q8CDN8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc38Q8CDN8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc38Q8CDN8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc38Q8CDN8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms