Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd4Q8CC84 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd4Q8CC84 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd4Q8CC84 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lysmd4Q8CC84 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.74■□□□□ 0.27
Lysmd4Q8CC84 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd4Q8CC84 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd4Q8CC84 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Golgb1-201ENSMUST00000023534 498 ntBASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd4Q8CC84 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Gm12922-201ENSMUST00000120626 809 ntBASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Lysmd4Q8CC84 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd4Q8CC84 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd4Q8CC84 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Gm7860-201ENSMUST00000121190 879 ntBASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd4Q8CC84 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms