Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Shisa4Q8CA71 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Shisa4Q8CA71 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Gm6211-202ENSMUST00000167849 925 ntBASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Shisa4Q8CA71 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Shisa4Q8CA71 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Shisa4Q8CA71 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Gm22325-201ENSMUST00000158904 308 ntBASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Shisa4Q8CA71 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shisa4Q8CA71 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Shisa4Q8CA71 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Shisa4Q8CA71 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Gm7290-201ENSMUST00000104990 617 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Gm12918-201ENSMUST00000120234 636 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Gm15710-201ENSMUST00000121821 636 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Gm10653-202ENSMUST00000139570 835 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Mir5133-201ENSMUST00000174955 77 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Gm5075-201ENSMUST00000196916 622 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.82■■□□□ 1.08
Shisa4Q8CA71 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Shisa4Q8CA71 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shisa4Q8CA71 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Gm26524-201ENSMUST00000192339 390 ntBASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Gm10252-201ENSMUST00000209541 832 ntBASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shisa4Q8CA71 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms