Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap54Q8C6S9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap54Q8C6S9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap54Q8C6S9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap54Q8C6S9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.08■□□□□ 0.48
Cfap54Q8C6S9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.08■□□□□ 0.48
Cfap54Q8C6S9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Gm21814-202ENSMUST00000203277 873 ntBASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap54Q8C6S9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Gm27741-201ENSMUST00000185060 237 ntBASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap54Q8C6S9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cfap54Q8C6S9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap54Q8C6S9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cfap54Q8C6S9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap54Q8C6S9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cfap54Q8C6S9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap54Q8C6S9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap54Q8C6S9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.01■□□□□ 0.47
Cfap54Q8C6S9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms